Ok, so this is the deal. My car started making a clicking noise like this 01' Mustang GT bad throwout bearing? - YouTube so I changed the clutch with a new throw out bearing and all of that but the noise has not gone away. My mechanic says it should be the transmission(input shaft or something), he says he doesn't work on transmission so he isn't sure. It is like a clicking noise that goes away 2-3 secs after I press the clutch and comes back as soon as I release it. Thanks for the help!!! Mike.